HCSGD entry for RPS3A

1. General information

Official gene symbolRPS3A
Entrez ID6189
Gene full nameribosomal protein S3A
Other gene symbolsFTE1 MFTL S3A
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000184Nuclear-transcribed mRNA catabolic process, nonsense-mediated decayTASbiological_process
GO:0002181Cytoplasmic translationIBAbiological_process
GO:0003723RNA bindingNASmolecular_function
GO:0003735Structural constituent of ribosomeIBA IEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIEA ISScellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0005829CytosolISS TAScellular_component
GO:0005840RibosomeIEAcellular_component
GO:0006412TranslationIC IEA IMP NAS TASbiological_process
GO:0006413Translational initiationTASbiological_process
GO:0006414Translational elongationTASbiological_process
GO:0006415Translational terminationTASbiological_process
GO:0006614SRP-dependent cotranslational protein targeting to membraneTASbiological_process
GO:0010467Gene expressionTASbiological_process
GO:0016032Viral processTASbiological_process
GO:0016070RNA metabolic processTASbiological_process
GO:0016071MRNA metabolic processTASbiological_process
GO:0019058Viral life cycleTASbiological_process
GO:0019083Viral transcriptionTASbiological_process
GO:0022627Cytosolic small ribosomal subunitIDA IEAcellular_component
GO:0030154Cell differentiationIEAbiological_process
GO:0030529Ribonucleoprotein complexIDAcellular_component
GO:0043066Negative regulation of apoptotic processIMPbiological_process
GO:0044267Cellular protein metabolic processTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.38339889060.94801786030.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1Up0.4491561286
GSE28863_A2Up0.1621256334
GSE28863_A3Up0.0716970852
GSE28863_A4Up0.2530315558
GSE48662Down-0.3515214555

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-16-5pMIMAT0000069MIRT032020ProteomicsFunctional MTI (Weak)18668040
hsa-miR-92b-3pMIMAT0003218MIRT040576CLASHFunctional MTI (Weak)23622248
hsa-miR-342-3pMIMAT0000753MIRT043671CLASHFunctional MTI (Weak)23622248
hsa-miR-125b-5pMIMAT0000423MIRT045970CLASHFunctional MTI (Weak)23622248
hsa-miR-15b-5pMIMAT0000417MIRT046394CLASHFunctional MTI (Weak)23622248
hsa-miR-7-5pMIMAT0000252MIRT047756CLASHFunctional MTI (Weak)23622248
hsa-miR-92a-3pMIMAT0000092MIRT049447CLASHFunctional MTI (Weak)23622248
hsa-miR-25-3pMIMAT0000081MIRT050354CLASHFunctional MTI (Weak)23622248
hsa-let-7a-5pMIMAT0000062MIRT052412CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.