HCSGD entry for RPL30
1. General information
| Official gene symbol | RPL30 |
|---|---|
| Entrez ID | 6156 |
| Gene full name | ribosomal protein L30 |
| Other gene symbols | L30 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000184 | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | TAS | biological_process |
| GO:0003723 | RNA binding | TAS | molecular_function |
| GO:0003735 | Structural constituent of ribosome | IEA NAS TAS | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005840 | Ribosome | IEA | cellular_component |
| GO:0006412 | Translation | IEA NAS TAS | biological_process |
| GO:0006413 | Translational initiation | TAS | biological_process |
| GO:0006414 | Translational elongation | TAS | biological_process |
| GO:0006415 | Translational termination | TAS | biological_process |
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0016070 | RNA metabolic process | TAS | biological_process |
| GO:0016071 | MRNA metabolic process | TAS | biological_process |
| GO:0019058 | Viral life cycle | TAS | biological_process |
| GO:0019083 | Viral transcription | TAS | biological_process |
| GO:0022625 | Cytosolic large ribosomal subunit | IDA TAS | cellular_component |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8732492800 | 0.2672517078 | 0.9999902473 | 0.9890435137 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1399413316 |
| GSE13712_SHEAR | Down | -0.1500290135 |
| GSE13712_STATIC | Down | -0.1994417225 |
| GSE19018 | Up | 0.0396026989 |
| GSE19899_A1 | Down | -0.0709677675 |
| GSE19899_A2 | Down | -0.1811317772 |
| PubMed_21979375_A1 | Up | 0.1203215334 |
| PubMed_21979375_A2 | Down | -0.0327824027 |
| GSE35957 | Down | -0.3792317561 |
| GSE36640 | Down | -0.2213606429 |
| GSE54402 | Up | 0.1521621509 |
| GSE9593 | Up | 0.0243100187 |
| GSE43922 | Down | -0.1514379123 |
| GSE24585 | Down | -0.2073890538 |
| GSE37065 | Down | -0.2207469969 |
| GSE28863_A1 | Up | 0.5343109048 |
| GSE28863_A2 | Up | 0.2849129029 |
| GSE28863_A3 | Down | -0.3495995932 |
| GSE28863_A4 | Up | 0.1043854020 |
| GSE48662 | Down | -0.2909691524 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT031874 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-346 | MIMAT0000773 | MIRT042716 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044397 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048773 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050530 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052419 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
