HCSGD entry for SMAP1
1. General information
| Official gene symbol | SMAP1 |
|---|---|
| Entrez ID | 60682 |
| Gene full name | small ArfGAP 1 |
| Other gene symbols | SMAP-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0008060 | ARF GTPase activator activity | IEA | molecular_function |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0030276 | Clathrin binding | IEA | molecular_function |
| GO:0032312 | Regulation of ARF GTPase activity | IEA | biological_process |
| GO:0045648 | Positive regulation of erythrocyte differentiation | IEA | biological_process |
| GO:2000369 | Regulation of clathrin-mediated endocytosis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5888191444 | 0.2633499183 | 0.9999902473 | 0.9853759091 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2619072230 |
| GSE13712_SHEAR | Down | -0.2073976696 |
| GSE13712_STATIC | Up | 0.0860996892 |
| GSE19018 | Up | 0.1858395013 |
| GSE19899_A1 | Up | 0.1077522270 |
| GSE19899_A2 | Up | 0.3395115263 |
| PubMed_21979375_A1 | Up | 0.0284931433 |
| PubMed_21979375_A2 | Up | 0.6173772146 |
| GSE35957 | Down | -0.2814588146 |
| GSE36640 | Up | 0.1149336490 |
| GSE54402 | Up | 0.1634184814 |
| GSE9593 | Down | -0.1570898398 |
| GSE43922 | Down | -0.0061588876 |
| GSE24585 | Down | -0.0803784910 |
| GSE37065 | Down | -0.1904014948 |
| GSE28863_A1 | Down | -0.3056346088 |
| GSE28863_A2 | Up | 0.1616518219 |
| GSE28863_A3 | Down | -0.3541057926 |
| GSE28863_A4 | Down | -0.3269452292 |
| GSE48662 | Up | 0.5097831708 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-25-3p | MIMAT0000081 | MIRT050219 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
