HCSGD entry for ABCE1
1. General information
| Official gene symbol | ABCE1 |
|---|---|
| Entrez ID | 6059 |
| Gene full name | ATP-binding cassette, sub-family E (OABP), member 1 |
| Other gene symbols | ABC38 OABP RLI RNASEL1 RNASELI RNS4I |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0006401 | RNA catabolic process | TAS | biological_process |
| GO:0008428 | Ribonuclease inhibitor activity | TAS | molecular_function |
| GO:0009615 | Response to virus | TAS | biological_process |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0016887 | ATPase activity | IEA | molecular_function |
| GO:0043086 | Negative regulation of catalytic activity | TAS | biological_process |
| GO:0050790 | Regulation of catalytic activity | TAS | biological_process |
| GO:0051536 | Iron-sulfur cluster binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7232964667 | 0.0115928536 | 0.9999902473 | 0.2129326147 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5024332461 |
| GSE13712_SHEAR | Up | 0.2428500043 |
| GSE13712_STATIC | Up | 0.1414618290 |
| GSE19018 | Down | -0.9267703333 |
| GSE19899_A1 | Up | 0.1312100146 |
| GSE19899_A2 | Down | -0.0223623955 |
| PubMed_21979375_A1 | Up | 0.3762312055 |
| PubMed_21979375_A2 | Down | -0.0037027623 |
| GSE35957 | Down | -0.1950316706 |
| GSE36640 | Down | -0.6702138746 |
| GSE54402 | Up | 0.3787954459 |
| GSE9593 | Down | -0.5413900232 |
| GSE43922 | Up | 0.1084225682 |
| GSE24585 | Down | -0.8279453230 |
| GSE37065 | Down | -0.3057968951 |
| GSE28863_A1 | Down | -0.6504257722 |
| GSE28863_A2 | Down | -0.7223381636 |
| GSE28863_A3 | Down | -0.6523611882 |
| GSE28863_A4 | Down | -0.1652219175 |
| GSE48662 | Down | -0.4876041060 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-203a | MIMAT0000264 | MIRT004713 | Luciferase reporter assay//qRT-PCR//Western blot | Functional MTI | 19843643 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030495 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047854 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
