HCSGD entry for NIF3L1
1. General information
| Official gene symbol | NIF3L1 |
|---|---|
| Entrez ID | 60491 |
| Gene full name | NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) |
| Other gene symbols | ALS2CR1 CALS-7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003934 | GTP cyclohydrolase I activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0008134 | Transcription factor binding | IPI | molecular_function |
| GO:0035998 | 7,8-dihydroneopterin 3'-triphosphate biosynthetic process | IEA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8658915011 | 0.0361514228 | 0.9999902473 | 0.3581466717 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1418670304 |
| GSE13712_SHEAR | Down | -0.5777469170 |
| GSE13712_STATIC | Down | -0.5244886515 |
| GSE19018 | Up | 0.4940662012 |
| GSE19899_A1 | Down | -0.7098110424 |
| GSE19899_A2 | Down | -0.7055160828 |
| PubMed_21979375_A1 | Down | -0.0870857948 |
| PubMed_21979375_A2 | Down | -0.9519384201 |
| GSE35957 | Down | -0.2597920586 |
| GSE36640 | Down | -0.9379596415 |
| GSE54402 | Down | -0.0047891066 |
| GSE9593 | Down | -0.3443569417 |
| GSE43922 | Down | -0.0069809185 |
| GSE24585 | Down | -0.1855567427 |
| GSE37065 | Up | 0.0419747115 |
| GSE28863_A1 | Up | 0.4101779981 |
| GSE28863_A2 | Up | 0.4064393537 |
| GSE28863_A3 | Down | -0.1496467797 |
| GSE28863_A4 | Up | 0.0890797935 |
| GSE48662 | Down | -0.4046171238 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
