HCSGD entry for SLC5A7

1. General information

Official gene symbolSLC5A7
Entrez ID60482
Gene full namesolute carrier family 5 (choline transporter), member 7
Other gene symbolsCHT CHT1 HMN7A hCHT
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005307Choline:sodium symporter activityIMPmolecular_function
GO:0005886Plasma membraneIDA IEA TAScellular_component
GO:0007268Synaptic transmissionTASbiological_process
GO:0007269Neurotransmitter secretionTASbiological_process
GO:0007271Synaptic transmission, cholinergicIEAbiological_process
GO:0007274Neuromuscular synaptic transmissionIEAbiological_process
GO:0008219Cell deathIEAbiological_process
GO:0008292Acetylcholine biosynthetic processIEA IMPbiological_process
GO:0015220Choline transmembrane transporter activityIEA IMPmolecular_function
GO:0016021Integral component of membraneIDA IEAcellular_component
GO:0033265Choline bindingIEAmolecular_function
GO:0034220Ion transmembrane transportIMPbiological_process
GO:0035725Sodium ion transmembrane transportIMPbiological_process
GO:0043025Neuronal cell bodyIEAcellular_component
GO:0055085Transmembrane transportTASbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.88311313780.63871716880.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0858957148
GSE13712_SHEARDown-0.0291251939
GSE13712_STATICDown-0.0392244332
GSE19018Down-0.0518638275
GSE19899_A1Up0.1282059955
GSE19899_A2Up0.0297577505
PubMed_21979375_A1Up0.1619897811
PubMed_21979375_A2Down-0.1031180488
GSE35957Up0.1699710294
GSE36640Up0.1051944344
GSE54402Up0.0223550598
GSE9593Down-0.0656399534
GSE43922Up0.0147817950
GSE24585Down-0.1865774260
GSE37065Down-0.0685693818
GSE28863_A1Down-0.0652057475
GSE28863_A2Down-0.0527652787
GSE28863_A3Up0.1633651573
GSE28863_A4Up0.0585497558
GSE48662Down-0.1340410362

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.