HCSGD entry for FAM3A
1. General information
| Official gene symbol | FAM3A |
|---|---|
| Entrez ID | 60343 |
| Gene full name | family with sequence similarity 3, member A |
| Other gene symbols | 2.19 DLD DXS560S XAP-7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0742295316 | 0.7043304966 | 0.5786908930 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0780160425 |
| GSE13712_SHEAR | Down | -0.5897050164 |
| GSE13712_STATIC | Down | -0.6296255722 |
| GSE19018 | Up | 0.3711239395 |
| GSE19899_A1 | Down | -0.3722743228 |
| GSE19899_A2 | Up | 0.5473930977 |
| PubMed_21979375_A1 | Up | 1.0747697283 |
| PubMed_21979375_A2 | Up | 0.7484827395 |
| GSE35957 | Down | -0.2173732007 |
| GSE36640 | Up | 0.1160860224 |
| GSE54402 | Up | 0.1581360153 |
| GSE9593 | Down | -0.1274765279 |
| GSE43922 | Up | 0.0785097940 |
| GSE24585 | Up | 0.0022580722 |
| GSE37065 | Down | -0.1530263578 |
| GSE28863_A1 | Up | 0.0082708491 |
| GSE28863_A2 | Up | 0.0902310335 |
| GSE28863_A3 | Up | 0.4810909124 |
| GSE28863_A4 | Up | 0.1413854113 |
| GSE48662 | Up | 0.6105763019 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029626 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040766 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049720 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
