HCSGD entry for RLF
1. General information
| Official gene symbol | RLF |
|---|---|
| Entrez ID | 6018 |
| Gene full name | rearranged L-myc fusion |
| Other gene symbols | ZN-15L ZNF292L |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | NAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IC | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | NAS | biological_process |
| GO:0008270 | Zinc ion binding | TAS | molecular_function |
| GO:0009294 | DNA mediated transformation | NAS | biological_process |
| GO:0015074 | DNA integration | IDA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | ISS | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | ISS | biological_process |
| GO:0051276 | Chromosome organization | IDA NAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0684428783 | 0.2416500399 | 0.5617352666 | 0.9469213488 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2919705504 |
| GSE13712_SHEAR | Down | -0.0434026336 |
| GSE13712_STATIC | Down | -0.2805559906 |
| GSE19018 | Up | 0.1721926003 |
| GSE19899_A1 | Up | 0.1667133170 |
| GSE19899_A2 | Up | 0.0059413114 |
| PubMed_21979375_A1 | Up | 1.0323602819 |
| PubMed_21979375_A2 | Up | 1.1962002712 |
| GSE35957 | Down | -0.2928965535 |
| GSE36640 | Down | -0.8431523113 |
| GSE54402 | Up | 0.1004984664 |
| GSE9593 | Down | -0.6123776067 |
| GSE43922 | Up | 0.0476489226 |
| GSE24585 | Up | 0.2887919104 |
| GSE37065 | Up | 0.3299667370 |
| GSE28863_A1 | Up | 0.4909455387 |
| GSE28863_A2 | Up | 1.0176155160 |
| GSE28863_A3 | Down | -0.3480332298 |
| GSE28863_A4 | Down | -0.3447405402 |
| GSE48662 | Down | -0.0238683859 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019789 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025096 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT027904 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036823 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-182-5p | MIMAT0000259 | MIRT047185 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050968 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
