HCSGD entry for RFNG
1. General information
| Official gene symbol | RFNG |
|---|---|
| Entrez ID | 5986 |
| Gene full name | RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005576 | Extracellular region | NAS | cellular_component |
| GO:0007389 | Pattern specification process | IEA | biological_process |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0009887 | Organ morphogenesis | NAS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016757 | Transferase activity, transferring glycosyl groups | IEA | molecular_function |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0030173 | Integral component of Golgi membrane | IEA | cellular_component |
| GO:0032092 | Positive regulation of protein binding | IEA | biological_process |
| GO:0033829 | O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity | IEA | molecular_function |
| GO:0045747 | Positive regulation of Notch signaling pathway | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1584047301 | 0.6552069868 | 0.7895040523 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0191281428 |
| GSE13712_SHEAR | Down | -0.4495147717 |
| GSE13712_STATIC | Up | 0.2740701395 |
| GSE19018 | Down | -0.0204588524 |
| GSE19899_A1 | Down | -0.2227784392 |
| GSE19899_A2 | Up | 0.3441656028 |
| PubMed_21979375_A1 | Up | 0.6232580595 |
| PubMed_21979375_A2 | Up | 1.0861801055 |
| GSE35957 | Down | -0.4270419343 |
| GSE36640 | Up | 0.1820800876 |
| GSE54402 | Up | 0.0574254209 |
| GSE9593 | Up | 0.1255364779 |
| GSE43922 | Up | 0.0632886660 |
| GSE24585 | Up | 0.2237713310 |
| GSE37065 | Down | -0.3593679105 |
| GSE28863_A1 | Up | 0.1075722940 |
| GSE28863_A2 | Up | 0.0192690663 |
| GSE28863_A3 | Up | 0.1653663515 |
| GSE28863_A4 | Down | -0.0062670733 |
| GSE48662 | Up | 0.5499254582 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
