HCSGD entry for RBMS2
1. General information
| Official gene symbol | RBMS2 |
|---|---|
| Entrez ID | 5939 |
| Gene full name | RNA binding motif, single stranded interacting protein 2 |
| Other gene symbols | SCR3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006396 | RNA processing | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1067627674 | 0.5676477413 | 0.6794252418 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1976116694 |
| GSE13712_SHEAR | Up | 0.5959889984 |
| GSE13712_STATIC | Up | 0.4129561869 |
| GSE19018 | Up | 0.0954373904 |
| GSE19899_A1 | Down | -0.2146223810 |
| GSE19899_A2 | Up | 0.4934781710 |
| PubMed_21979375_A1 | Down | -0.4819129349 |
| PubMed_21979375_A2 | Up | 0.5608491716 |
| GSE35957 | Up | 0.1838700761 |
| GSE36640 | Up | 0.9348676934 |
| GSE54402 | Down | -0.4604327560 |
| GSE9593 | Up | 0.1553800927 |
| GSE43922 | Down | -0.1462864689 |
| GSE24585 | Up | 0.3074880995 |
| GSE37065 | Up | 0.0546926896 |
| GSE28863_A1 | Up | 0.1842863042 |
| GSE28863_A2 | Up | 0.2178772042 |
| GSE28863_A3 | Down | -0.1236256263 |
| GSE28863_A4 | Down | -0.0226162638 |
| GSE48662 | Down | -0.0038450483 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029628 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-484 | MIMAT0002174 | MIRT042145 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18b-5p | MIMAT0001412 | MIRT042413 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
