HCSGD entry for GNB4
1. General information
| Official gene symbol | GNB4 |
|---|---|
| Entrez ID | 59345 |
| Gene full name | guanine nucleotide binding protein (G protein), beta polypeptide 4 |
| Other gene symbols | CMTD1F |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004871 | Signal transducer activity | IEA | molecular_function |
| GO:0005765 | Lysosomal membrane | IDA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006112 | Energy reserve metabolic process | TAS | biological_process |
| GO:0008219 | Cell death | IEA | biological_process |
| GO:0032403 | Protein complex binding | IDA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0071377 | Cellular response to glucagon stimulus | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5938778314 | 0.1081731317 | 0.9999902473 | 0.6290819708 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6969076577 |
| GSE13712_SHEAR | Up | 0.0969870917 |
| GSE13712_STATIC | Down | -0.0123541993 |
| GSE19018 | Up | 0.1766706830 |
| GSE19899_A1 | Up | 0.0011002726 |
| GSE19899_A2 | Down | -0.1797196725 |
| PubMed_21979375_A1 | Up | 0.3288266468 |
| PubMed_21979375_A2 | Down | -0.3154723050 |
| GSE35957 | Up | 0.9872639804 |
| GSE36640 | Down | -1.1216367689 |
| GSE54402 | Up | 0.0587781956 |
| GSE9593 | Down | -0.1883287821 |
| GSE43922 | Up | 0.1756292447 |
| GSE24585 | Down | -0.1425298522 |
| GSE37065 | Down | -0.0507768353 |
| GSE28863_A1 | Down | -0.2054438731 |
| GSE28863_A2 | Up | 0.2400170262 |
| GSE28863_A3 | Down | -0.3758382362 |
| GSE28863_A4 | Down | -0.2094435614 |
| GSE48662 | Up | 0.0638889418 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020371 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020513 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022248 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027970 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030715 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046179 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
