HCSGD entry for FAM60A
1. General information
| Official gene symbol | FAM60A |
|---|---|
| Entrez ID | 58516 |
| Gene full name | family with sequence similarity 60, member A |
| Other gene symbols | C12orf14 TERA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0016580 | Sin3 complex | IDA | cellular_component |
| GO:0030336 | Negative regulation of cell migration | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0285035599 | 0.3121757190 | 0.3927398230 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1240821080 |
| GSE13712_SHEAR | Up | 0.7763464942 |
| GSE13712_STATIC | Up | 0.2512540080 |
| GSE19018 | Down | -0.0564021674 |
| GSE19899_A1 | Up | 0.4229966895 |
| GSE19899_A2 | Up | 0.6947583539 |
| PubMed_21979375_A1 | Up | 1.2794732260 |
| PubMed_21979375_A2 | Up | 1.0584447498 |
| GSE35957 | Down | -1.2496325725 |
| GSE36640 | Down | -1.5946674597 |
| GSE54402 | Up | 0.5967370148 |
| GSE9593 | Down | -0.6952726925 |
| GSE43922 | Up | 0.8889966692 |
| GSE24585 | Down | -0.3650608674 |
| GSE37065 | Down | -0.1475690925 |
| GSE28863_A1 | Down | -0.0390328826 |
| GSE28863_A2 | Up | 0.0628028909 |
| GSE28863_A3 | Up | 0.1369473403 |
| GSE28863_A4 | Up | 0.0621313425 |
| GSE48662 | Up | 0.0980269605 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027679 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041352 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044476 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046021 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30d-5p | MIMAT0000245 | MIRT047776 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
