HCSGD entry for SUGP1
1. General information
| Official gene symbol | SUGP1 |
|---|---|
| Entrez ID | 57794 |
| Gene full name | SURP and G patch domain containing 1 |
| Other gene symbols | F23858 RBP SF4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000398 | MRNA splicing, via spliceosome | TAS | biological_process |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005681 | Spliceosomal complex | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0008380 | RNA splicing | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1398027583 | 0.9026877208 | 0.7517361389 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1619574347 |
| GSE13712_SHEAR | Down | -0.1372557681 |
| GSE13712_STATIC | Down | -0.0249255241 |
| GSE19018 | Down | -0.0760580176 |
| GSE19899_A1 | Down | -0.1177837039 |
| GSE19899_A2 | Up | 0.5445627902 |
| PubMed_21979375_A1 | Up | 0.7630014593 |
| PubMed_21979375_A2 | Up | 0.1898695126 |
| GSE35957 | Down | -0.4643619521 |
| GSE36640 | Up | 0.0122228365 |
| GSE54402 | Up | 0.3029945406 |
| GSE9593 | Down | -0.1558756268 |
| GSE43922 | Up | 0.0332326159 |
| GSE24585 | Up | 0.2070986851 |
| GSE37065 | Up | 0.1484124057 |
| GSE28863_A1 | Down | -0.1470064433 |
| GSE28863_A2 | Up | 0.0639834227 |
| GSE28863_A3 | Up | 0.8364738240 |
| GSE28863_A4 | Down | -0.1052222289 |
| GSE48662 | Up | 0.1322346352 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023869 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049813 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
