HCSGD entry for RBAK
1. General information
| Official gene symbol | RBAK |
|---|---|
| Entrez ID | 57786 |
| Gene full name | RB-associated KRAB zinc finger |
| Other gene symbols | ZNF769 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA TAS | biological_process |
| GO:0008270 | Zinc ion binding | NAS | molecular_function |
| GO:0045892 | Negative regulation of transcription, DNA-templated | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2599162912 | 0.8715232742 | 0.9531317409 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0734693589 |
| GSE13712_SHEAR | Up | 0.3070456792 |
| GSE13712_STATIC | Up | 0.2260900859 |
| GSE19018 | Down | -0.1925051418 |
| GSE19899_A1 | Up | 0.0856463668 |
| GSE19899_A2 | Up | 0.0819577160 |
| PubMed_21979375_A1 | Up | 0.4879825910 |
| PubMed_21979375_A2 | Up | 0.9542465701 |
| GSE35957 | Up | 0.2546236529 |
| GSE36640 | Down | -0.3805370028 |
| GSE54402 | Up | 0.0476071528 |
| GSE9593 | Up | 0.0631940714 |
| GSE43922 | Up | 0.0680995718 |
| GSE24585 | Down | -0.1933185114 |
| GSE37065 | Down | -0.0170627678 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.0369141366 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020857 | Reporter assay;Other | Non-Functional MTI | 20584899 |
| hsa-miR-125a-5p | MIMAT0000443 | MIRT021316 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040111 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043869 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
