HCSGD entry for USP29

1. General information

Official gene symbolUSP29
Entrez ID57663
Gene full nameubiquitin specific peptidase 29
Other gene symbolsHOM-TES-84/86
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0004221Ubiquitin thiolesterase activityTASmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0006511Ubiquitin-dependent protein catabolic processIEAbiological_process
GO:0008234Cysteine-type peptidase activityIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.76995815510.43520561530.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1794664857
GSE13712_SHEARUp0.1303258045
GSE13712_STATICDown-0.2687777330
GSE19018Down-0.1305970740
GSE19899_A1Up0.0732222459
GSE19899_A2Up0.1331950592
PubMed_21979375_A1Down-0.0532400759
PubMed_21979375_A2Down-0.1103123939
GSE35957Up0.1923340969
GSE36640Up0.0307471315
GSE54402Up0.1513642265
GSE9593Down-0.1827773560
GSE43922Up0.0466953883
GSE24585Up0.2161377130
GSE37065Down-0.1006005547
GSE28863_A1Down-0.0821685066
GSE28863_A2Down-0.0723416113
GSE28863_A3Up0.2829100100
GSE28863_A4Down-0.1744554054
GSE48662Up0.0348496302

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT016785MicroarrayFunctional MTI (Weak)18185580
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.