HCSGD entry for LRCH2
1. General information
| Official gene symbol | LRCH2 |
|---|---|
| Entrez ID | 57631 |
| Gene full name | leucine-rich repeats and calponin homology (CH) domain containing 2 |
| Other gene symbols | dA204F4.4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
Not in the Gene Ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3688081950 | 0.0082215379 | 0.9999902473 | 0.1812387772 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.0172069014 |
| GSE13712_SHEAR | Down | -0.0101866476 |
| GSE13712_STATIC | Up | 0.3285508369 |
| GSE19018 | Up | 0.5575966332 |
| GSE19899_A1 | Up | 0.0352871925 |
| GSE19899_A2 | Down | -0.3144433079 |
| PubMed_21979375_A1 | Up | 0.4122580023 |
| PubMed_21979375_A2 | Down | -0.2016236999 |
| GSE35957 | Up | 0.4059768666 |
| GSE36640 | Up | 0.7689903633 |
| GSE54402 | Down | -0.1310564836 |
| GSE9593 | Down | -0.0546096873 |
| GSE43922 | Down | -0.0948872001 |
| GSE24585 | Down | -0.2249492893 |
| GSE37065 | Up | 0.3506838282 |
| GSE28863_A1 | Down | -0.8975520679 |
| GSE28863_A2 | Down | -1.6099480700 |
| GSE28863_A3 | Down | -0.6776053785 |
| GSE28863_A4 | Down | -0.0068090193 |
| GSE48662 | Down | -0.3367690689 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018027 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027383 | Sequencing | Functional MTI (Weak) | 20371350 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
