HCSGD entry for CGN
1. General information
| Official gene symbol | CGN |
|---|---|
| Entrez ID | 57530 |
| Gene full name | cingulin |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003774 | Motor activity | IEA | molecular_function |
| GO:0003779 | Actin binding | ISS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005923 | Tight junction | IDA NAS | cellular_component |
| GO:0007179 | Transforming growth factor beta receptor signaling pathway | TAS | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016459 | Myosin complex | IEA | cellular_component |
| GO:0030054 | Cell junction | TAS | cellular_component |
| GO:0043296 | Apical junction complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6759674898 | 0.8784634322 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0868780443 |
| GSE13712_SHEAR | Down | -0.0533102141 |
| GSE13712_STATIC | Down | -0.2928954919 |
| GSE19018 | Down | -0.0404489404 |
| GSE19899_A1 | Up | 0.1484642372 |
| GSE19899_A2 | Up | 0.0077412675 |
| PubMed_21979375_A1 | Up | 0.0731589635 |
| PubMed_21979375_A2 | Up | 0.1018885085 |
| GSE35957 | Up | 0.0860687260 |
| GSE36640 | Down | -0.1287545995 |
| GSE54402 | Down | -0.0180394812 |
| GSE9593 | Up | 0.0519082929 |
| GSE43922 | Up | 0.0965468231 |
| GSE24585 | Up | 0.2195422101 |
| GSE37065 | Down | -0.0464558214 |
| GSE28863_A1 | Down | -0.0744325993 |
| GSE28863_A2 | Up | 0.0752134701 |
| GSE28863_A3 | Up | 0.1280800459 |
| GSE28863_A4 | Up | 0.0717461331 |
| GSE48662 | Down | -0.0308762308 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125b-5p | MIMAT0000423 | MIRT004994 | Microarray | Functional MTI (Weak) | 17891175 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021173 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031289 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
