HCSGD entry for LRRC47

1. General information

Official gene symbolLRRC47
Entrez ID57470
Gene full nameleucine rich repeat containing 47
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003723RNA bindingIEAmolecular_function
GO:0004826Phenylalanine-tRNA ligase activityIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.21019407320.66479611340.88334792461.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2342441694
GSE13712_SHEARDown-0.0670898595
GSE13712_STATICUp0.1180504913
GSE19018Down-0.4038122387
GSE19899_A1Down-0.1877646471
GSE19899_A2Up0.4857931486
PubMed_21979375_A1Up0.5840954111
PubMed_21979375_A2Up0.5182452591
GSE35957Down-0.2139429436
GSE36640Up0.0721078261
GSE54402Up0.0354165276
GSE9593Down-0.0226617481
GSE43922Up0.0057732046
GSE24585Down-0.1375265792
GSE37065Down-0.2249707093
GSE28863_A1Up0.4377027316
GSE28863_A2Up0.8200801953
GSE28863_A3Down-0.0889212197
GSE28863_A4Down-0.1276864798
GSE48662Up0.0471828175

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-let-7b-5pMIMAT0000063MIRT032448ProteomicsFunctional MTI (Weak)18668040
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.