HCSGD entry for ISY1
1. General information
| Official gene symbol | ISY1 |
|---|---|
| Entrez ID | 57461 |
| Gene full name | ISY1 splicing factor homolog (S. cerevisiae) |
| Other gene symbols | FSAP33 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000398 | MRNA splicing, via spliceosome | IC | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0071013 | Catalytic step 2 spliceosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9777005091 | 0.1051554006 | 0.9999902473 | 0.6214048463 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0814698369 |
| GSE13712_SHEAR | Down | -0.1124328627 |
| GSE13712_STATIC | Down | -0.0045622888 |
| GSE19018 | Down | -0.1358464699 |
| GSE19899_A1 | Down | -0.2329747371 |
| GSE19899_A2 | Down | -0.0148753430 |
| PubMed_21979375_A1 | Down | -0.0335400849 |
| PubMed_21979375_A2 | Down | -0.5772735669 |
| GSE35957 | Down | -0.1029635905 |
| GSE36640 | Down | -0.3589907523 |
| GSE54402 | Up | 0.0415594829 |
| GSE9593 | Down | -0.1766550708 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.2781694545 |
| GSE28863_A2 | Down | -0.1360061953 |
| GSE28863_A3 | Up | 0.0497080293 |
| GSE28863_A4 | Down | -0.3246750440 |
| GSE48662 | Down | -0.0094559589 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-421 | MIMAT0003339 | MIRT039403 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
