HCSGD entry for REXO1
1. General information
| Official gene symbol | REXO1 |
|---|---|
| Entrez ID | 57455 |
| Gene full name | REX1, RNA exonuclease 1 homolog (S. cerevisiae) |
| Other gene symbols | ELOABP1 EloA-BP1 REX1 TCEB3BP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0004527 | Exonuclease activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2796563504 | 0.9373859656 | 0.9763675288 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0876887645 |
| GSE13712_SHEAR | Up | 0.1035702218 |
| GSE13712_STATIC | Up | 0.1455513444 |
| GSE19018 | Up | 0.1146403000 |
| GSE19899_A1 | Up | 0.0416198613 |
| GSE19899_A2 | Up | 0.2014087106 |
| PubMed_21979375_A1 | Down | -0.2340644952 |
| PubMed_21979375_A2 | Up | 0.0138628403 |
| GSE35957 | Up | 0.1847857611 |
| GSE36640 | Down | -0.0172657439 |
| GSE54402 | Up | 0.1841741084 |
| GSE9593 | Up | 0.1415352077 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1015306226 |
| GSE28863_A2 | Down | -0.0309102135 |
| GSE28863_A3 | Up | 0.5000369690 |
| GSE28863_A4 | Up | 0.0733325438 |
| GSE48662 | Up | 0.1897225991 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT041869 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30d-5p | MIMAT0000245 | MIRT047818 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT049959 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
