HCSGD entry for GALNT16
1. General information
| Official gene symbol | GALNT16 |
|---|---|
| Entrez ID | 57452 |
| Gene full name | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 |
| Other gene symbols | GALNACT16 GALNTL1 GalNAc-T16 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0004653 | Polypeptide N-acetylgalactosaminyltransferase activity | IEA | molecular_function |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1963003875 | 0.4151884161 | 0.8576747552 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0098673775 |
| GSE13712_SHEAR | Down | -0.1582126893 |
| GSE13712_STATIC | Down | -0.1024124012 |
| GSE19018 | Up | 0.0229938217 |
| GSE19899_A1 | Down | -0.0200699748 |
| GSE19899_A2 | Down | -0.6958607943 |
| PubMed_21979375_A1 | Down | -0.2721034864 |
| PubMed_21979375_A2 | Down | -0.2919063016 |
| GSE35957 | Down | -0.0279207593 |
| GSE36640 | Up | 0.0430279945 |
| GSE54402 | Down | -0.0107309528 |
| GSE9593 | Up | 0.0117254194 |
| GSE43922 | Down | -0.2256182363 |
| GSE24585 | Down | -0.1136675523 |
| GSE37065 | Down | -0.0036012989 |
| GSE28863_A1 | Up | 1.1430843521 |
| GSE28863_A2 | Up | 0.9268319504 |
| GSE28863_A3 | Up | 0.3359999169 |
| GSE28863_A4 | Up | 0.1297224340 |
| GSE48662 | Up | 0.5387828856 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016819 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
