HCSGD entry for LYRM2
1. General information
| Official gene symbol | LYRM2 |
|---|---|
| Entrez ID | 57226 |
| Gene full name | LYR motif containing 2 |
| Other gene symbols | DJ122O8.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005739 | Mitochondrion | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0633596140 | 0.9695504350 | 0.5429963867 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5098313034 |
| GSE13712_SHEAR | Up | 0.1649275235 |
| GSE13712_STATIC | Up | 0.0861580660 |
| GSE19018 | Down | -0.3209527174 |
| GSE19899_A1 | Up | 0.2320437036 |
| GSE19899_A2 | Up | 0.3772804774 |
| PubMed_21979375_A1 | Up | 0.7654001188 |
| PubMed_21979375_A2 | Up | 0.4949944711 |
| GSE35957 | Down | -0.1233244272 |
| GSE36640 | Down | -0.2874372000 |
| GSE54402 | Up | 0.2022338988 |
| GSE9593 | Up | 0.0843184189 |
| GSE43922 | Up | 0.0278130313 |
| GSE24585 | Up | 0.0940564291 |
| GSE37065 | Up | 0.0091258631 |
| GSE28863_A1 | Up | 0.3121709264 |
| GSE28863_A2 | Up | 0.3059993481 |
| GSE28863_A3 | Up | 0.2188176463 |
| GSE28863_A4 | Down | -0.0299213751 |
| GSE48662 | Up | 0.1867714408 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-760 | MIMAT0004957 | MIRT036790 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047951 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048166 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
