HCSGD entry for GOPC
1. General information
| Official gene symbol | GOPC |
|---|---|
| Entrez ID | 57120 |
| Gene full name | golgi-associated PDZ and coiled-coil motif containing |
| Other gene symbols | CAL FIG GOPC1 PIST dJ94G16.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005083 | Small GTPase regulator activity | IEA | molecular_function |
| GO:0005109 | Frizzled binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005886 | Plasma membrane | NAS | cellular_component |
| GO:0006888 | ER to Golgi vesicle-mediated transport | NAS | biological_process |
| GO:0006893 | Golgi to plasma membrane transport | NAS | biological_process |
| GO:0007289 | Spermatid nucleus differentiation | IEA | biological_process |
| GO:0008022 | Protein C-terminus binding | IEA | molecular_function |
| GO:0014069 | Postsynaptic density | IEA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016020 | Membrane | IDA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030140 | Trans-Golgi network transport vesicle | IDA NAS | cellular_component |
| GO:0030425 | Dendrite | IEA | cellular_component |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0043004 | Cytoplasmic sequestering of CFTR protein | NAS | biological_process |
| GO:0043234 | Protein complex | IDA | cellular_component |
| GO:0044325 | Ion channel binding | IPI | molecular_function |
| GO:0045176 | Apical protein localization | NAS | biological_process |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
| GO:0051260 | Protein homooligomerization | IPI | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1296191710 | 0.3149603473 | 0.7308710797 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4540436788 |
| GSE13712_SHEAR | Up | 0.0391367563 |
| GSE13712_STATIC | Up | 0.0746387502 |
| GSE19018 | Down | -0.3063750691 |
| GSE19899_A1 | Up | 0.3418723936 |
| GSE19899_A2 | Up | 0.5380444870 |
| PubMed_21979375_A1 | Down | -0.3639663735 |
| PubMed_21979375_A2 | Up | 0.4000361544 |
| GSE35957 | Up | 0.4476580381 |
| GSE36640 | Up | 0.9685285479 |
| GSE54402 | Down | -0.0323077443 |
| GSE9593 | Down | -0.3848372311 |
| GSE43922 | Up | 0.2298972867 |
| GSE24585 | Up | 0.2211635122 |
| GSE37065 | Down | -0.1515761227 |
| GSE28863_A1 | Up | 0.1925610107 |
| GSE28863_A2 | Up | 0.4375609403 |
| GSE28863_A3 | Down | -0.4258270797 |
| GSE28863_A4 | Down | -0.3651207578 |
| GSE48662 | Down | -0.2058403840 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020115 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027025 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
