HCSGD entry for PDSS2
1. General information
| Official gene symbol | PDSS2 |
|---|---|
| Entrez ID | 57107 |
| Gene full name | prenyl (decaprenyl) diphosphate synthase, subunit 2 |
| Other gene symbols | C6orf210 COQ10D3 DLP1 bA59I9.3 hDLP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000010 | Trans-hexaprenyltranstransferase activity | IDA | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005759 | Mitochondrial matrix | TAS | cellular_component |
| GO:0006744 | Ubiquinone biosynthetic process | IDA IEA TAS | biological_process |
| GO:0008299 | Isoprenoid biosynthetic process | IDA IEA | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046982 | Protein heterodimerization activity | IDA | molecular_function |
| GO:0050347 | Trans-octaprenyltranstransferase activity | IEA | molecular_function |
| GO:0050878 | Regulation of body fluid levels | IEA | biological_process |
| GO:0051290 | Protein heterotetramerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8591356825 | 0.4620904753 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0114682650 |
| GSE13712_SHEAR | Down | -0.0955993176 |
| GSE13712_STATIC | Up | 0.0339726168 |
| GSE19018 | Down | -0.1759711227 |
| GSE19899_A1 | Up | 0.0139154607 |
| GSE19899_A2 | Up | 0.1753227035 |
| PubMed_21979375_A1 | Up | 0.1698408592 |
| PubMed_21979375_A2 | Down | -0.0110098872 |
| GSE35957 | Down | -0.0923114157 |
| GSE36640 | Down | -0.1514697704 |
| GSE54402 | Up | 0.0234481634 |
| GSE9593 | Down | -0.0784480163 |
| GSE43922 | Up | 0.2532283953 |
| GSE24585 | Up | 0.2246626451 |
| GSE37065 | Down | -0.0530540522 |
| GSE28863_A1 | Down | -0.0305347629 |
| GSE28863_A2 | Up | 0.0283119251 |
| GSE28863_A3 | Down | -0.5359971357 |
| GSE28863_A4 | Down | -0.2478038700 |
| GSE48662 | Down | -0.0928684103 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029379 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
