HCSGD entry for CDC42SE2
1. General information
| Official gene symbol | CDC42SE2 |
|---|---|
| Entrez ID | 56990 |
| Gene full name | CDC42 small effector 2 |
| Other gene symbols | SPEC2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001891 | Phagocytic cup | IEA | cellular_component |
| GO:0005198 | Structural molecule activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006909 | Phagocytosis | IEA | biological_process |
| GO:0008360 | Regulation of cell shape | IEA | biological_process |
| GO:0009966 | Regulation of signal transduction | IDA | biological_process |
| GO:0042995 | Cell projection | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3462439003 | 0.3501259945 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2754569649 |
| GSE13712_SHEAR | Up | 0.2686318717 |
| GSE13712_STATIC | Up | 0.0862670821 |
| GSE19018 | Down | -0.3316173668 |
| GSE19899_A1 | Down | -0.3974378701 |
| GSE19899_A2 | Down | -0.1765780023 |
| PubMed_21979375_A1 | Up | 0.3358029585 |
| PubMed_21979375_A2 | Down | -0.3197260695 |
| GSE35957 | Up | 0.0413785329 |
| GSE36640 | Down | -0.4415074429 |
| GSE54402 | Up | 0.5376511930 |
| GSE9593 | Up | 0.6122310867 |
| GSE43922 | Down | -0.0354374688 |
| GSE24585 | Up | 0.1528718568 |
| GSE37065 | Up | 0.1673347517 |
| GSE28863_A1 | Up | 0.1517920607 |
| GSE28863_A2 | Up | 0.1710106693 |
| GSE28863_A3 | Down | -0.2399719263 |
| GSE28863_A4 | Down | -0.1249447310 |
| GSE48662 | Down | -0.4782641416 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-421 | MIMAT0003339 | MIRT039379 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
