HCSGD entry for TMX4
1. General information
| Official gene symbol | TMX4 |
|---|---|
| Entrez ID | 56255 |
| Gene full name | thioredoxin-related transmembrane protein 4 |
| Other gene symbols | DJ971N18.2 PDIA14 TXNDC13 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0045454 | Cell redox homeostasis | IEA | biological_process |
| GO:0055114 | Oxidation-reduction process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0013554880 | 0.9856286387 | 0.0995980556 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4372669685 |
| GSE13712_SHEAR | Down | -0.0759883600 |
| GSE13712_STATIC | Down | -0.0738992188 |
| GSE19018 | Down | -0.2455004109 |
| GSE19899_A1 | Up | 1.9793495828 |
| GSE19899_A2 | Up | 2.0274844270 |
| PubMed_21979375_A1 | Up | 2.3682345192 |
| PubMed_21979375_A2 | Up | 2.1815044957 |
| GSE35957 | Down | -0.0929927578 |
| GSE36640 | Up | 0.6469625574 |
| GSE54402 | Up | 0.5440438507 |
| GSE9593 | Up | 0.3349597271 |
| GSE43922 | Up | 1.6200936347 |
| GSE24585 | Up | 0.2462404914 |
| GSE37065 | Up | 0.2410922746 |
| GSE28863_A1 | Up | 0.4082862193 |
| GSE28863_A2 | Up | 0.0255858647 |
| GSE28863_A3 | Down | -0.4134978326 |
| GSE28863_A4 | Up | 0.0332696722 |
| GSE48662 | Up | 0.0726030373 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029647 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030889 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042945 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-197-3p | MIMAT0000227 | MIRT048092 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050532 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
