HCSGD entry for PCDHB2
1. General information
| Official gene symbol | PCDHB2 |
|---|---|
| Entrez ID | 56133 |
| Gene full name | protocadherin beta 2 |
| Other gene symbols | PCDH-BETA2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007155 | Cell adhesion | TAS | biological_process |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0007268 | Synaptic transmission | TAS | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0007416 | Synapse assembly | TAS | biological_process |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
| GO:0016339 | Calcium-dependent cell-cell adhesion | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0319780290 | 0.1047940656 | 0.4129272059 | 0.6208158001 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2681565474 |
| GSE13712_SHEAR | Down | -0.5719622246 |
| GSE13712_STATIC | Down | -0.1501182939 |
| GSE19018 | Down | -0.3131971306 |
| GSE19899_A1 | Down | -0.1487776650 |
| GSE19899_A2 | Down | -1.1002016300 |
| PubMed_21979375_A1 | Up | 0.2820079047 |
| PubMed_21979375_A2 | Down | -0.9111057184 |
| GSE35957 | Up | 0.1477725009 |
| GSE36640 | Up | 3.3022987875 |
| GSE54402 | Down | -0.6584799953 |
| GSE9593 | Up | 0.7102557191 |
| GSE43922 | Down | -0.3894808278 |
| GSE24585 | Up | 2.1891250049 |
| GSE37065 | Up | 0.5461479463 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.3825742062 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
