HCSGD entry for RCC2
1. General information
| Official gene symbol | RCC2 |
|---|---|
| Entrez ID | 55920 |
| Gene full name | regulator of chromosome condensation 2 |
| Other gene symbols | TD-60 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0000775 | Chromosome, centromeric region | IEA | cellular_component |
| GO:0005730 | Nucleolus | IEA | cellular_component |
| GO:0005819 | Spindle | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0007067 | Mitosis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1312847118 | 0.1073742905 | 0.7353787827 | 0.6269864271 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1973124069 |
| GSE13712_SHEAR | Down | -0.2736121488 |
| GSE13712_STATIC | Down | -0.3950630166 |
| GSE19018 | Down | -0.9288257176 |
| GSE19899_A1 | Up | 0.7993613486 |
| GSE19899_A2 | Up | 0.0322630872 |
| PubMed_21979375_A1 | Up | 0.7442307246 |
| PubMed_21979375_A2 | Up | 0.5156786135 |
| GSE35957 | Down | -0.6949214948 |
| GSE36640 | Down | -0.8291326882 |
| GSE54402 | Up | 0.3745729650 |
| GSE9593 | Down | -0.7875763073 |
| GSE43922 | Up | 0.4531108169 |
| GSE24585 | Down | -0.2466309317 |
| GSE37065 | Down | -0.2731048923 |
| GSE28863_A1 | Up | 0.5464075788 |
| GSE28863_A2 | Up | 0.7198366752 |
| GSE28863_A3 | Up | 0.2750898746 |
| GSE28863_A4 | Down | -0.1197446031 |
| GSE48662 | Up | 0.1672424758 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021351 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022250 | Proteomics;Microarray | Non-Functional MTI (Weak) | 18668037 |
| hsa-miR-1 | MIMAT0000416 | MIRT023502 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025685 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036431 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040314 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042027 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-210-3p | MIMAT0000267 | MIRT047008 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-182-5p | MIMAT0000259 | MIRT047181 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT048286 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049492 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3131 | MIMAT0014996 | MIRT052659 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
