HCSGD entry for ZNF395
1. General information
| Official gene symbol | ZNF395 |
|---|---|
| Entrez ID | 55893 |
| Gene full name | zinc finger protein 395 |
| Other gene symbols | HDBP-2 HDBP2 HDRF-2 PBF PRF-1 PRF1 Si-1-8-14 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IDA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IC | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9688606170 | 0.0063217317 | 0.9999902473 | 0.1617048591 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.7286711178 |
| GSE13712_SHEAR | Down | -0.5413144629 |
| GSE13712_STATIC | Down | -0.5852840674 |
| GSE19018 | Up | 1.4361042948 |
| GSE19899_A1 | Down | -0.3580043101 |
| GSE19899_A2 | Down | -0.7296952512 |
| PubMed_21979375_A1 | Down | -0.5381681989 |
| PubMed_21979375_A2 | Down | -0.5622226765 |
| GSE35957 | Down | -0.6576742909 |
| GSE36640 | Down | -1.2535018491 |
| GSE54402 | Down | -0.2745927456 |
| GSE9593 | Down | -0.0525068489 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.0943698867 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT007083 | GFP reporter assay | Functional MTI | 23221562 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016491 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022669 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036521 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-769-3p | MIMAT0003887 | MIRT039097 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045995 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
