HCSGD entry for PRKCSH
1. General information
| Official gene symbol | PRKCSH |
|---|---|
| Entrez ID | 5589 |
| Gene full name | protein kinase C substrate 80K-H |
| Other gene symbols | AGE-R2 G19P1 PCLD PKCSH PLD1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001701 | In utero embryonic development | IEA | biological_process |
| GO:0001889 | Liver development | IEA | biological_process |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005080 | Protein kinase C binding | IPI | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005622 | Intracellular | NAS | cellular_component |
| GO:0005788 | Endoplasmic reticulum lumen | TAS | cellular_component |
| GO:0006457 | Protein folding | TAS | biological_process |
| GO:0006491 | N-glycan processing | IEA | biological_process |
| GO:0006807 | Nitrogen compound metabolic process | IEA | biological_process |
| GO:0010977 | Negative regulation of neuron projection development | IEA | biological_process |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0035556 | Intracellular signal transduction | NAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0045087 | Innate immune response | TAS | biological_process |
| GO:0051291 | Protein heterooligomerization | IEA | biological_process |
| GO:0072001 | Renal system development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0486962957 | 0.4690152122 | 0.4864270209 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0953031879 |
| GSE13712_SHEAR | Down | -0.5235683311 |
| GSE13712_STATIC | Down | -0.4793710838 |
| GSE19018 | Up | 0.4596888458 |
| GSE19899_A1 | Down | -0.3252240740 |
| GSE19899_A2 | Up | 0.8382380322 |
| PubMed_21979375_A1 | Up | 1.2153905831 |
| PubMed_21979375_A2 | Up | 1.0930386459 |
| GSE35957 | Down | -0.4622792711 |
| GSE36640 | Down | -0.2230230371 |
| GSE54402 | Down | -0.1134231124 |
| GSE9593 | Up | 0.2219662272 |
| GSE43922 | Up | 0.0238106189 |
| GSE24585 | Down | -0.3708074063 |
| GSE37065 | Down | -0.1217047490 |
| GSE28863_A1 | Up | 0.2706143024 |
| GSE28863_A2 | Up | 0.0062508856 |
| GSE28863_A3 | Up | 0.6897618619 |
| GSE28863_A4 | Up | 0.0689451840 |
| GSE48662 | Up | 0.6331963623 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-330-5p | MIMAT0004693 | MIRT038254 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-454-3p | MIMAT0003885 | MIRT039223 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040594 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT043014 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-342-3p | MIMAT0000753 | MIRT043699 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-361-5p | MIMAT0000703 | MIRT044099 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
