HCSGD entry for RNF130
1. General information
| Official gene symbol | RNF130 |
|---|---|
| Entrez ID | 55819 |
| Gene full name | ring finger protein 130 |
| Other gene symbols | G1RZFP GOLIATH GP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | IDA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0012501 | Programmed cell death | ISS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2001417689 | 0.9216589871 | 0.8628753846 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0958071534 |
| GSE13712_SHEAR | Down | -0.3158832780 |
| GSE13712_STATIC | Down | -0.0782641621 |
| GSE19018 | Down | -0.0287052072 |
| GSE19899_A1 | Down | -0.0425839240 |
| GSE19899_A2 | Up | 0.3074823827 |
| PubMed_21979375_A1 | Up | 0.5167633269 |
| PubMed_21979375_A2 | Up | 0.1768318766 |
| GSE35957 | Down | -0.0566647289 |
| GSE36640 | Up | 0.1337235052 |
| GSE54402 | Up | 0.1575629326 |
| GSE9593 | Up | 0.1844506233 |
| GSE43922 | Up | 0.0977722247 |
| GSE24585 | Down | -0.1640765716 |
| GSE37065 | Up | 0.1369446613 |
| GSE28863_A1 | Up | 0.0935981232 |
| GSE28863_A2 | Up | 0.2963851690 |
| GSE28863_A3 | Up | 0.0305631319 |
| GSE28863_A4 | Up | 0.2105750941 |
| GSE48662 | Up | 0.2411697574 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-320a | MIMAT0000510 | MIRT044645 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
