HCSGD entry for ZNF83
1. General information
| Official gene symbol | ZNF83 |
|---|---|
| Entrez ID | 55769 |
| Gene full name | zinc finger protein 83 |
| Other gene symbols | HPF1 ZNF816B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8552879412 | 0.0546063979 | 0.9999902473 | 0.4407528366 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0691900951 |
| GSE13712_SHEAR | Up | 0.1818879002 |
| GSE13712_STATIC | Down | -0.3174290264 |
| GSE19018 | Down | -0.5268628732 |
| GSE19899_A1 | Down | -0.2570889129 |
| GSE19899_A2 | Down | -0.6880295078 |
| PubMed_21979375_A1 | Down | -0.1021834143 |
| PubMed_21979375_A2 | Down | -0.1782598465 |
| GSE35957 | Down | -0.5223028249 |
| GSE36640 | Down | -0.5956333358 |
| GSE54402 | Up | 0.1295956213 |
| GSE9593 | Down | -0.5509928125 |
| GSE43922 | Up | 0.0342466644 |
| GSE24585 | Up | 0.4052658191 |
| GSE37065 | Up | 0.3162503171 |
| GSE28863_A1 | Up | 0.1372551828 |
| GSE28863_A2 | Down | -0.0168060754 |
| GSE28863_A3 | Down | -0.3817507941 |
| GSE28863_A4 | Up | 0.1080281173 |
| GSE48662 | Down | -0.4754460232 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018807 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-340-5p | MIMAT0004692 | MIRT019592 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020980 | Reporter assay;Other | Non-Functional MTI | 20584899 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
