HCSGD entry for TMEM30A
1. General information
| Official gene symbol | TMEM30A |
|---|---|
| Entrez ID | 55754 |
| Gene full name | transmembrane protein 30A |
| Other gene symbols | C6orf67 CDC50A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0036010 | Protein localization to endosome | IMP | biological_process |
| GO:0045332 | Phospholipid translocation | IEA | biological_process |
| GO:0070863 | Positive regulation of protein exit from endoplasmic reticulum | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0526892823 | 0.8655239125 | 0.5025707220 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0205470783 |
| GSE13712_SHEAR | Up | 0.1442429725 |
| GSE13712_STATIC | Down | -0.0837155122 |
| GSE19018 | Up | 0.7054461731 |
| GSE19899_A1 | Up | 0.1231148665 |
| GSE19899_A2 | Up | 0.1456258486 |
| PubMed_21979375_A1 | Down | -0.0935144159 |
| PubMed_21979375_A2 | Up | 0.1189497299 |
| GSE35957 | Up | 0.4348107927 |
| GSE36640 | Up | 0.8607891522 |
| GSE54402 | Down | -0.1410815320 |
| GSE9593 | Up | 0.2877743411 |
| GSE43922 | Up | 0.0183851701 |
| GSE24585 | Up | 0.4586904505 |
| GSE37065 | Up | 0.0476879393 |
| GSE28863_A1 | Up | 0.2450216999 |
| GSE28863_A2 | Up | 0.4976410830 |
| GSE28863_A3 | Down | -0.4303010159 |
| GSE28863_A4 | Down | -0.3732262674 |
| GSE48662 | Up | 0.1876203837 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT022012 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024298 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026305 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-27a-3p | MIMAT0000084 | MIRT028708 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029088 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037266 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
