HCSGD entry for TENM3
1. General information
| Official gene symbol | TENM3 |
|---|---|
| Entrez ID | 55714 |
| Gene full name | teneurin transmembrane protein 3 |
| Other gene symbols | MCOPCB9 ODZ3 TNM3 Ten-m3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007156 | Homophilic cell adhesion | ISS | biological_process |
| GO:0007165 | Signal transduction | IEA | biological_process |
| GO:0010976 | Positive regulation of neuron projection development | ISS | biological_process |
| GO:0016020 | Membrane | ISS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030424 | Axon | IEA | cellular_component |
| GO:0042803 | Protein homodimerization activity | ISS | molecular_function |
| GO:0046982 | Protein heterodimerization activity | ISS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1998343794 | 0.0311236655 | 0.8628753846 | 0.3313753331 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0502315759 |
| GSE13712_SHEAR | Up | 1.1097888400 |
| GSE13712_STATIC | Up | 0.9905679259 |
| GSE19018 | Up | 0.0093083060 |
| GSE19899_A1 | Down | -0.0224371830 |
| GSE19899_A2 | Down | -1.1843957464 |
| PubMed_21979375_A1 | Down | -0.5133281292 |
| PubMed_21979375_A2 | Down | -0.4922654368 |
| GSE35957 | Up | 0.7242981524 |
| GSE36640 | Down | -0.3976274895 |
| GSE54402 | Down | -0.1823062547 |
| GSE9593 | Up | 0.0843893191 |
| GSE43922 | Down | -0.6472993811 |
| GSE24585 | Up | 0.0027003299 |
| GSE37065 | Down | -0.1220118455 |
| GSE28863_A1 | Up | 0.4695739939 |
| GSE28863_A2 | Up | 0.1283388547 |
| GSE28863_A3 | Down | -0.8338066886 |
| GSE28863_A4 | Down | -0.5848781675 |
| GSE48662 | Up | 0.0666837545 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047456 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047712 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052084 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 23645774 | TNM3/4, 26 vs |
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