HCSGD entry for NSUN5
1. General information
| Official gene symbol | NSUN5 |
|---|---|
| Entrez ID | 55695 |
| Gene full name | NOP2/Sun domain family, member 5 |
| Other gene symbols | NOL1 NOL1R NSUN5A WBSCR20 WBSCR20A p120 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3268958512 | 0.3251500931 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5398502703 |
| GSE13712_SHEAR | Up | 0.9423209033 |
| GSE13712_STATIC | Up | 0.3065598359 |
| GSE19018 | Down | -0.4931965391 |
| GSE19899_A1 | Down | -0.4523760813 |
| GSE19899_A2 | Up | 0.0873954968 |
| PubMed_21979375_A1 | Down | -0.0615116536 |
| PubMed_21979375_A2 | Up | 0.4681383745 |
| GSE35957 | Down | -0.6823676558 |
| GSE36640 | Up | 0.2772780164 |
| GSE54402 | Down | -0.2801888577 |
| GSE9593 | Down | -0.2297335981 |
| GSE43922 | Up | 0.2461220484 |
| GSE24585 | Up | 0.0416841912 |
| GSE37065 | Down | -0.0391330412 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.3069610234 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT007211 | Immunohistochemistry//In situ hybridization//Luciferase reporter assay//Western blot | Functional MTI | 23139153 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020938 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025357 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046634 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
