HCSGD entry for SLC30A6
1. General information
| Official gene symbol | SLC30A6 |
|---|---|
| Entrez ID | 55676 |
| Gene full name | solute carrier family 30 (zinc transporter), member 6 |
| Other gene symbols | MST103 MSTP103 ZNT6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005385 | Zinc ion transmembrane transporter activity | IEA | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006895 | Golgi to endosome transport | IEA | biological_process |
| GO:0008324 | Cation transmembrane transporter activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8420137077 | 0.5874668288 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2101962174 |
| GSE13712_SHEAR | Up | 0.0075995135 |
| GSE13712_STATIC | Down | -0.1041870520 |
| GSE19018 | Down | -0.5612484224 |
| GSE19899_A1 | Up | 0.0215294136 |
| GSE19899_A2 | Down | -0.0785443471 |
| PubMed_21979375_A1 | Up | 0.1479049831 |
| PubMed_21979375_A2 | Down | -0.0375672477 |
| GSE35957 | Up | 0.1221420477 |
| GSE36640 | Down | -0.0637339784 |
| GSE54402 | Up | 0.0264271857 |
| GSE9593 | Up | 0.1284218350 |
| GSE43922 | Up | 0.0082075451 |
| GSE24585 | Up | 0.0396316101 |
| GSE37065 | Down | -0.0319547681 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.1338720617 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026066 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032161 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042568 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
