HCSGD entry for SLC48A1
1. General information
| Official gene symbol | SLC48A1 |
|---|---|
| Entrez ID | 55652 |
| Gene full name | solute carrier family 48 (heme transporter), member 1 |
| Other gene symbols | HRG-1 HRG1 hHRG-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005765 | Lysosomal membrane | IEA | cellular_component |
| GO:0010008 | Endosome membrane | IEA | cellular_component |
| GO:0015232 | Heme transporter activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1428225029 | 0.4094792561 | 0.7572827593 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1478236416 |
| GSE13712_SHEAR | Down | -1.1179309758 |
| GSE13712_STATIC | Down | -0.1472904493 |
| GSE19018 | Up | 0.0868580095 |
| GSE19899_A1 | Down | -0.2060302991 |
| GSE19899_A2 | Up | 0.1740388619 |
| PubMed_21979375_A1 | Up | 0.4081410628 |
| PubMed_21979375_A2 | Up | 0.1646728001 |
| GSE35957 | Down | -0.0374457815 |
| GSE36640 | Up | 1.3708954396 |
| GSE54402 | Up | 0.0039441337 |
| GSE9593 | Up | 0.2672745293 |
| GSE43922 | Up | 0.0516440651 |
| GSE24585 | Down | -0.1560598783 |
| GSE37065 | Down | -0.1513621254 |
| GSE28863_A1 | Down | -0.3607161509 |
| GSE28863_A2 | Down | -0.1368951440 |
| GSE28863_A3 | Up | 0.1071646633 |
| GSE28863_A4 | Up | 0.3280437851 |
| GSE48662 | Up | 0.6408339671 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024829 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026764 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036961 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038132 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
