HCSGD entry for LRRC40
1. General information
| Official gene symbol | LRRC40 |
|---|---|
| Entrez ID | 55631 |
| Gene full name | leucine rich repeat containing 40 |
| Other gene symbols | dJ677H15.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
Not in the Gene Ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9784350025 | 0.0150289617 | 0.9999902473 | 0.2409320950 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2133540471 |
| GSE13712_SHEAR | Up | 0.2361663108 |
| GSE13712_STATIC | Up | 0.1381860544 |
| GSE19018 | Up | 0.0937709485 |
| GSE19899_A1 | Down | -0.4735434288 |
| GSE19899_A2 | Down | -0.3061067161 |
| PubMed_21979375_A1 | Down | -0.0819824189 |
| PubMed_21979375_A2 | Down | -0.4879771821 |
| GSE35957 | Down | -0.2179761275 |
| GSE36640 | Down | -0.4966419330 |
| GSE54402 | Down | -0.1529219249 |
| GSE9593 | Down | -0.3986198135 |
| GSE43922 | Down | -0.1585870731 |
| GSE24585 | Up | 0.0888632659 |
| GSE37065 | Down | -0.0309450616 |
| GSE28863_A1 | Down | -0.3803416080 |
| GSE28863_A2 | Up | 0.4458369175 |
| GSE28863_A3 | Down | -1.0670635935 |
| GSE28863_A4 | Down | -0.2946707098 |
| GSE48662 | Down | -0.4035921873 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016325 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-425-5p | MIMAT0003393 | MIRT016662 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020510 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021873 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025256 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028855 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032216 | Proteomics | Functional MTI (Weak) | 18668040 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
