HCSGD entry for SLC39A4
1. General information
| Official gene symbol | SLC39A4 |
|---|---|
| Entrez ID | 55630 |
| Gene full name | solute carrier family 39 (zinc transporter), member 4 |
| Other gene symbols | AEZ AWMS2 ZIP4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005385 | Zinc ion transmembrane transporter activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IDA TAS | cellular_component |
| GO:0006882 | Cellular zinc ion homeostasis | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016023 | Cytoplasmic membrane-bounded vesicle | IDA | cellular_component |
| GO:0016324 | Apical plasma membrane | IEA | cellular_component |
| GO:0034224 | Cellular response to zinc ion starvation | IEA | biological_process |
| GO:0046873 | Metal ion transmembrane transporter activity | IEA | molecular_function |
| GO:0055038 | Recycling endosome membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2412705900 | 0.3573240834 | 0.9285011985 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1071784646 |
| GSE13712_SHEAR | Up | 0.7090390656 |
| GSE13712_STATIC | Up | 0.6119498765 |
| GSE19018 | Down | -0.0222274206 |
| GSE19899_A1 | Down | -0.0659718253 |
| GSE19899_A2 | Up | 0.1866988052 |
| PubMed_21979375_A1 | Down | -0.0721102550 |
| PubMed_21979375_A2 | Up | 0.0604581726 |
| GSE35957 | Down | -1.2361154139 |
| GSE36640 | Up | 0.0004775616 |
| GSE54402 | Up | 0.0857376827 |
| GSE9593 | Down | -0.1459985339 |
| GSE43922 | Up | 0.1978561165 |
| GSE24585 | Down | -0.0355177338 |
| GSE37065 | Down | -0.0948921519 |
| GSE28863_A1 | Down | -0.3150376135 |
| GSE28863_A2 | Down | -0.2268288090 |
| GSE28863_A3 | Up | 0.3595234586 |
| GSE28863_A4 | Up | 0.1722890578 |
| GSE48662 | Up | 0.0035423911 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
