HCSGD entry for FAM46A
1. General information
| Official gene symbol | FAM46A |
|---|---|
| Entrez ID | 55603 |
| Gene full name | family with sequence similarity 46, member A |
| Other gene symbols | C6orf37 XTP11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
Not in the Gene Ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0879754797 | 0.1870244558 | 0.6229762174 | 0.8387579997 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.8495423399 |
| GSE13712_SHEAR | Up | 0.8223280841 |
| GSE13712_STATIC | Up | 0.5629844431 |
| GSE19018 | Down | -0.4746165414 |
| GSE19899_A1 | Up | 0.2039761600 |
| GSE19899_A2 | Up | 0.1273019881 |
| PubMed_21979375_A1 | Up | 0.4227765654 |
| PubMed_21979375_A2 | Up | 0.0971683615 |
| GSE35957 | Down | -0.6463103260 |
| GSE36640 | Up | 0.9717854590 |
| GSE54402 | Down | -0.3030753108 |
| GSE9593 | Down | -0.0131932852 |
| GSE43922 | Up | 0.2255702781 |
| GSE24585 | Down | -0.0210149349 |
| GSE37065 | Up | 0.3674733784 |
| GSE28863_A1 | Down | -0.0942353045 |
| GSE28863_A2 | Up | 0.1284072337 |
| GSE28863_A3 | Down | -1.2816590340 |
| GSE28863_A4 | Down | -0.1893854866 |
| GSE48662 | Down | -0.0767418323 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021473 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030931 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031187 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-484 | MIMAT0002174 | MIRT041668 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-346 | MIMAT0000773 | MIRT042717 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT047395 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
