HCSGD entry for SUPT20H
1. General information
| Official gene symbol | SUPT20H |
|---|---|
| Entrez ID | 55578 |
| Gene full name | suppressor of Ty 20 homolog (S. cerevisiae) |
| Other gene symbols | C13 C13orf19 FAM48A P38IP SPT20 bA421P11.4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000124 | SAGA complex | IEA | cellular_component |
| GO:0003712 | Transcription cofactor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0006914 | Autophagy | IEA | biological_process |
| GO:0007369 | Gastrulation | IEA | biological_process |
| GO:0070461 | SAGA-type complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9543887694 | 0.0804394134 | 0.9999902473 | 0.5365549417 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0158306007 |
| GSE13712_SHEAR | Up | 0.3931208497 |
| GSE13712_STATIC | Up | 0.1552736273 |
| GSE19018 | Down | -0.0666517305 |
| GSE19899_A1 | Down | -0.3186026083 |
| GSE19899_A2 | Down | -0.5758699850 |
| PubMed_21979375_A1 | Down | -0.1622425928 |
| PubMed_21979375_A2 | Down | -0.4879398318 |
| GSE35957 | Down | -0.5513568725 |
| GSE36640 | Down | -0.4712141703 |
| GSE54402 | Down | -0.0465662166 |
| GSE9593 | Down | -0.3941751504 |
| GSE43922 | Down | -0.3806681237 |
| GSE24585 | Up | 0.0557021284 |
| GSE37065 | Down | -0.0044175507 |
| GSE28863_A1 | Down | -0.1141740003 |
| GSE28863_A2 | Down | -0.0227189419 |
| GSE28863_A3 | Down | -0.3106758128 |
| GSE28863_A4 | Up | 0.1470712331 |
| GSE48662 | Up | 0.2835469373 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT039729 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052010 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
