HCSGD entry for TRIM36
1. General information
| Official gene symbol | TRIM36 |
|---|---|
| Entrez ID | 55521 |
| Gene full name | tripartite motif containing 36 |
| Other gene symbols | HAPRIN RBCC728 RNF98 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001669 | Acrosomal vesicle | IEA | cellular_component |
| GO:0004842 | Ubiquitin-protein ligase activity | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0007340 | Acrosome reaction | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0051726 | Regulation of cell cycle | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0672758520 | 0.9807442460 | 0.5587780688 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0818774733 |
| GSE13712_SHEAR | Up | 0.0910376151 |
| GSE13712_STATIC | Down | -0.0344545120 |
| GSE19018 | Down | -0.0107936204 |
| GSE19899_A1 | Up | 0.1799500007 |
| GSE19899_A2 | Up | 0.5699044150 |
| PubMed_21979375_A1 | Up | 0.2710502964 |
| PubMed_21979375_A2 | Up | 0.4488589507 |
| GSE35957 | Up | 0.0614616690 |
| GSE36640 | Up | 0.4948250211 |
| GSE54402 | Up | 0.4526264593 |
| GSE9593 | Up | 0.1244717038 |
| GSE43922 | Up | 0.4834770546 |
| GSE24585 | Up | 0.2359707631 |
| GSE37065 | Up | 0.0187622650 |
| GSE28863_A1 | Down | -0.0306149768 |
| GSE28863_A2 | Up | 0.0634391691 |
| GSE28863_A3 | Up | 0.0455600854 |
| GSE28863_A4 | Down | -0.0422411946 |
| GSE48662 | Down | -0.0084973411 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-142-3p | MIMAT0000434 | MIRT021589 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT021747 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021969 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028267 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT050046 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
