HCSGD entry for TRPV6

1. General information

Official gene symbolTRPV6
Entrez ID55503
Gene full nametransient receptor potential cation channel, subfamily V, member 6
Other gene symbolsABP/ZF CAT1 CATL ECAC2 HSA277909 LP6728 ZFAB
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005262Calcium channel activityIDA IEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005516Calmodulin bindingIDAmolecular_function
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0006816Calcium ion transportNASbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0017158Regulation of calcium ion-dependent exocytosisNASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.78598803620.73020301660.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1202623247
GSE13712_SHEARDown-0.2175994360
GSE13712_STATICUp0.1180900560
GSE19018Up0.0640864584
GSE19899_A1Up0.0840004170
GSE19899_A2Up0.1874627602
PubMed_21979375_A1Down-0.0449663072
PubMed_21979375_A2Up0.1277456758
GSE35957Down-0.0315581575
GSE36640Down-0.1142271751
GSE54402Down-0.0287491224
GSE9593Down-0.0360966275
GSE43922Up0.1522572078
GSE24585Up0.1329637335
GSE37065Down-0.0150565665
GSE28863_A1Down-0.0914369418
GSE28863_A2Down-0.0510257137
GSE28863_A3Down-0.1154416903
GSE28863_A4Up0.0953958995
GSE48662Down-0.0278107776

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-26b-5pMIMAT0000083MIRT029133MicroarrayFunctional MTI (Weak)19088304
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.