HCSGD entry for TMCO6
1. General information
| Official gene symbol | TMCO6 |
|---|---|
| Entrez ID | 55374 |
| Gene full name | transmembrane and coiled-coil domains 6 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006606 | Protein import into nucleus | IEA | biological_process |
| GO:0008565 | Protein transporter activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9973069336 | 0.0058428365 | 0.9999902473 | 0.1545621106 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1744123595 |
| GSE13712_SHEAR | Down | -0.4047119228 |
| GSE13712_STATIC | Down | -0.4703484350 |
| GSE19018 | Down | -0.1487316238 |
| GSE19899_A1 | Down | -0.2137651830 |
| GSE19899_A2 | Down | -1.1327993447 |
| PubMed_21979375_A1 | Down | -0.6612253925 |
| PubMed_21979375_A2 | Down | -1.1969263159 |
| GSE35957 | Down | -0.4150390433 |
| GSE36640 | Down | -1.2142387867 |
| GSE54402 | Down | -0.1918254215 |
| GSE9593 | Down | -0.6521577170 |
| GSE43922 | Down | -0.2533691362 |
| GSE24585 | Down | -0.2260532735 |
| GSE37065 | Down | -0.3898364330 |
| GSE28863_A1 | Up | 0.1686481041 |
| GSE28863_A2 | Down | -0.0527710130 |
| GSE28863_A3 | Down | -0.0581991082 |
| GSE28863_A4 | Down | -0.1156013907 |
| GSE48662 | Down | -0.0034803882 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-320a | MIMAT0000510 | MIRT044768 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
