HCSGD entry for TMEM63B
1. General information
| Official gene symbol | TMEM63B |
|---|---|
| Entrez ID | 55362 |
| Gene full name | transmembrane protein 63B |
| Other gene symbols | C6orf110 RP3-421H19.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0256606626 | 0.9286024315 | 0.3754387437 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0857906860 |
| GSE13712_SHEAR | Up | 0.2251365897 |
| GSE13712_STATIC | Up | 0.0664572857 |
| GSE19018 | Up | 0.0331761611 |
| GSE19899_A1 | Up | 0.1291786362 |
| GSE19899_A2 | Up | 1.2856254273 |
| PubMed_21979375_A1 | Down | -0.2510487380 |
| PubMed_21979375_A2 | Up | 0.4003775476 |
| GSE35957 | Up | 0.2233590425 |
| GSE36640 | Up | 1.0046584632 |
| GSE54402 | Up | 0.2221583780 |
| GSE9593 | Up | 0.5003765151 |
| GSE43922 | Up | 0.5327758223 |
| GSE24585 | Up | 0.3260297867 |
| GSE37065 | Up | 0.2702165494 |
| GSE28863_A1 | Down | -0.0985969280 |
| GSE28863_A2 | Up | 0.2401469941 |
| GSE28863_A3 | Down | -0.3345240056 |
| GSE28863_A4 | Down | -0.4455579814 |
| GSE48662 | Up | 0.2911580821 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019193 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038450 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043255 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046406 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052285 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
