HCSGD entry for STRBP
1. General information
| Official gene symbol | STRBP |
|---|---|
| Entrez ID | 55342 |
| Gene full name | spermatid perinuclear RNA binding protein |
| Other gene symbols | ILF3L SPNR p74 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003725 | Double-stranded RNA binding | IEA | molecular_function |
| GO:0003727 | Single-stranded RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006928 | Cellular component movement | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007286 | Spermatid development | IEA | biological_process |
| GO:0007638 | Mechanosensory behavior | IEA | biological_process |
| GO:0015630 | Microtubule cytoskeleton | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5867748148 | 0.2724778580 | 0.9999902473 | 0.9987313327 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1169237251 |
| GSE13712_SHEAR | Down | -0.3224118229 |
| GSE13712_STATIC | Down | -0.1498982837 |
| GSE19018 | Down | -0.1029119035 |
| GSE19899_A1 | Up | 0.1280475926 |
| GSE19899_A2 | Down | -0.2272505551 |
| PubMed_21979375_A1 | Up | 0.4338331394 |
| PubMed_21979375_A2 | Up | 0.2742260831 |
| GSE35957 | Down | -0.2963031732 |
| GSE36640 | Down | -1.3341923586 |
| GSE54402 | Up | 0.2857562922 |
| GSE9593 | Down | -0.0383722938 |
| GSE43922 | Up | 0.3306790315 |
| GSE24585 | Down | -0.4715682599 |
| GSE37065 | Up | 0.1274664531 |
| GSE28863_A1 | Up | 0.0038779595 |
| GSE28863_A2 | Up | 0.0043020646 |
| GSE28863_A3 | Up | 0.1105750939 |
| GSE28863_A4 | Up | 0.0530839891 |
| GSE48662 | Down | -0.3513998164 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019861 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020149 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020761 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-33a-5p | MIMAT0000091 | MIRT028221 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030912 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040658 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
