HCSGD entry for BRF2
1. General information
| Official gene symbol | BRF2 |
|---|---|
| Entrez ID | 55290 |
| Gene full name | BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit |
| Other gene symbols | BRFU TFIIIB50 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006352 | DNA-templated transcription, initiation | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006383 | Transcription from RNA polymerase III promoter | TAS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0010467 | Gene expression | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1229466814 | 0.8605465750 | 0.7172898737 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5270117595 |
| GSE13712_SHEAR | Down | -0.2065051447 |
| GSE13712_STATIC | Down | -0.0248778126 |
| GSE19018 | Up | 0.0599413838 |
| GSE19899_A1 | Up | 0.0057084294 |
| GSE19899_A2 | Up | 0.5900714434 |
| PubMed_21979375_A1 | Up | 0.3842277993 |
| PubMed_21979375_A2 | Down | -0.4811735274 |
| GSE35957 | Up | 0.0668065448 |
| GSE36640 | Up | 1.1457275950 |
| GSE54402 | Up | 0.1982297020 |
| GSE9593 | Up | 0.2460759260 |
| GSE43922 | Up | 0.2451042764 |
| GSE24585 | Down | -0.0106179912 |
| GSE37065 | Up | 0.0698833063 |
| GSE28863_A1 | Up | 0.0980827878 |
| GSE28863_A2 | Up | 0.0313888917 |
| GSE28863_A3 | Down | -0.4262906365 |
| GSE28863_A4 | Down | -0.0230138714 |
| GSE48662 | Down | -0.0202899984 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
