HCSGD entry for PGM2
1. General information
| Official gene symbol | PGM2 |
|---|---|
| Entrez ID | 55276 |
| Gene full name | phosphoglucomutase 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000287 | Magnesium ion binding | IEA | molecular_function |
| GO:0004614 | Phosphoglucomutase activity | IBA IEA | molecular_function |
| GO:0005829 | Cytosol | IBA TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | IEA TAS | biological_process |
| GO:0005978 | Glycogen biosynthetic process | TAS | biological_process |
| GO:0005980 | Glycogen catabolic process | TAS | biological_process |
| GO:0006006 | Glucose metabolic process | IEA TAS | biological_process |
| GO:0008973 | Phosphopentomutase activity | IDA | molecular_function |
| GO:0016052 | Carbohydrate catabolic process | IBA | biological_process |
| GO:0016868 | Intramolecular transferase activity, phosphotransferases | IEA | molecular_function |
| GO:0019388 | Galactose catabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046386 | Deoxyribose phosphate catabolic process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4857667072 | 0.0473604726 | 0.9999902473 | 0.4083114969 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3162163683 |
| GSE13712_SHEAR | Up | 0.3977536688 |
| GSE13712_STATIC | Up | 0.2459587466 |
| GSE19018 | Up | 0.1586673260 |
| GSE19899_A1 | Down | -0.0124898349 |
| GSE19899_A2 | Down | -0.0427619617 |
| PubMed_21979375_A1 | Up | 1.0731334716 |
| PubMed_21979375_A2 | Up | 0.2650741055 |
| GSE35957 | Down | -0.2062414398 |
| GSE36640 | Down | -0.2373470012 |
| GSE54402 | Up | 0.1013231880 |
| GSE9593 | Down | -0.2788630418 |
| GSE43922 | Up | 0.1798287480 |
| GSE24585 | Down | -0.5984594537 |
| GSE37065 | Up | 0.0157485875 |
| GSE28863_A1 | Down | -0.1182884589 |
| GSE28863_A2 | Down | -0.3627589264 |
| GSE28863_A3 | Down | -0.9603528175 |
| GSE28863_A4 | Down | -0.1972282936 |
| GSE48662 | Down | -0.4169193589 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT002766 | Luciferase reporter assay//Microarray//Microarray;Other | Functional MTI (WeaK) | 15685193 |
| hsa-miR-375 | MIMAT0000728 | MIRT019888 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022985 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
