HCSGD entry for LRRC1
1. General information
| Official gene symbol | LRRC1 |
|---|---|
| Entrez ID | 55227 |
| Gene full name | leucine rich repeat containing 1 |
| Other gene symbols | LANO dJ523E19.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9862952053 | 0.0191667718 | 0.9999902473 | 0.2708311064 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0038387596 |
| GSE13712_SHEAR | Down | -0.6956600025 |
| GSE13712_STATIC | Down | -0.4008022834 |
| GSE19018 | Up | 0.0971404362 |
| GSE19899_A1 | Down | -0.3456819667 |
| GSE19899_A2 | Down | -0.4002057737 |
| PubMed_21979375_A1 | Down | -0.3582944627 |
| PubMed_21979375_A2 | Up | 0.0085108924 |
| GSE35957 | Up | 0.0666872947 |
| GSE36640 | Up | 0.2378028566 |
| GSE54402 | Down | -1.0087909368 |
| GSE9593 | Down | -0.0981714925 |
| GSE43922 | Up | 0.0540931837 |
| GSE24585 | Down | -0.0369176912 |
| GSE37065 | Down | -0.0427955050 |
| GSE28863_A1 | Down | -0.3220280573 |
| GSE28863_A2 | Down | -0.5018005792 |
| GSE28863_A3 | Down | -0.6388249273 |
| GSE28863_A4 | Down | -0.2304696682 |
| GSE48662 | Up | 0.0034249411 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002712 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002712 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-22-3p | MIMAT0000077 | MIRT030660 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
