HCSGD entry for LGI2

1. General information

Official gene symbolLGI2
Entrez ID55203
Gene full nameleucine-rich repeat LGI family, member 2
Other gene symbolsLGIL2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005576Extracellular regionIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.71073595990.55598327570.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0029170555
GSE13712_SHEARUp0.1795321509
GSE13712_STATICDown-0.0017332645
GSE19018Down-0.0103336647
GSE19899_A1Down-0.1241184995
GSE19899_A2Up0.0291105993
PubMed_21979375_A1Up0.2309387233
PubMed_21979375_A2Down-0.1053426545
GSE35957Up0.1363713828
GSE36640Up0.0729649777
GSE54402Up0.0557475272
GSE9593Up0.0158026609
GSE43922Down-0.0027667248
GSE24585Down-0.3171826356
GSE37065Down-0.5524108430
GSE28863_A1Up0.2312257280
GSE28863_A2Up0.0630702716
GSE28863_A3Up0.1460163219
GSE28863_A4Up0.1025878778
GSE48662Up0.0299231307

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-149-5pMIMAT0000450MIRT045542CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.